CDS

Accession Number TCMCG017C21916
gbkey CDS
Protein Id OMO80154.1
Location join(205342..205623,205733..205861,206043..206213,206459..206666,207016..207097,207181..207289,207519..207923)
GeneID InterPro:IPR000743
Organism Corchorus olitorius
locus_tag COLO4_24228

Protein

Length 461aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01018461.1
Definition Glycoside hydrolase, family 28 [Corchorus olitorius]
Locus_tag COLO4_24228

EGGNOG-MAPPER Annotation

COG_category G
Description Polygalacturonase
KEGG_TC -
KEGG_Module M00081        [VIEW IN KEGG]
KEGG_Reaction R01982        [VIEW IN KEGG]
R07413        [VIEW IN KEGG]
KEGG_rclass RC00049        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01213        [VIEW IN KEGG]
EC 3.2.1.67        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00040        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00040        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004553        [VIEW IN EMBL-EBI]
GO:0004650        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009664        [VIEW IN EMBL-EBI]
GO:0009825        [VIEW IN EMBL-EBI]
GO:0009827        [VIEW IN EMBL-EBI]
GO:0009831        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042545        [VIEW IN EMBL-EBI]
GO:0042547        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071669        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGAGAGATAGAAGATTAAGTCTTCTAGCATTTATGGCTATCATATTTCTTCTATTTATCACATCTTCAATAACTTCAGTCGAGGCAAAAAAGCATTCTGTTAAGAAAAGCAAGCCTCATAAGAGTAAGCACCAAAAAGACAAGAACATCAAAGGCAATCCTTGTCCAGACTCAAGCTCTGCACCGGCGGCGCCTCTTCCTAATTACCCAACCGGTTCAAAAATTTTTGATATCTTGTCATTTGGAGCCAAGGGTGATGGAGTTTCTGATGATTCAAAGGCACTTCAAGCAGCATGGAAAGCTGCCTGCAAAGTTACTGGGGCTACACTGGAAATTCCATCGGAATTCAAGTTTTTGATTATGCCCATAACTCTTCAAGGTCCATGCATGCCTCACCTTGTTTTTCAGATTGATGGAGCTTTGTTAGCCCCTCCAAAAGTGAGTTCATGGGCAAAGTTCAGTTTGTTTCAATGGATAAACTTCAAATGGGTCCATAATTTCACCATTCAAGGTACTGGATTTGTTGATGGTCAAGCCTCTGAGTGGTGGACTCCTTCTGATGACATTTACTATATTCAGGCTTTAAGATTCTACTCAAGCTTCAACGTGACAGTTCGAGACATCAGAATCCTAAACAGCCCTCAATGTCACCTAAAATTTGACAATTCCGGTGGAATTACAATAAACAACATTACAATTTCTTCCCCGGAGAGTAGTCCGAATACTGATGGCATTCATCTGCAAAACACACGAGATGTCGAAATTCAACATTCCAATATCGGCTGTGGAGATGACTGTGTATCCATTCAAACAGGTTGCTCGAACGTTCATATTCACCACATTAATTGCGGCCCTGGTCATGGGATTAGTTTGGGAAGCCTAGGGAAAGACAAAACTGTTGCCTGTGTCTCGGACATAGTTGTGGAGAAAATCTCACTTCTCAATACAATGGCTGGAGTGAGAATCAAGACCTGGCAGGGTGGTGTGGGATCTGTCAAGAACGTATCATTTTCCAATATTCAAGTCTCGGATGTGAAAGTTCCTATAATAATCGACCAATACTACTGTGACAAGAGTGTTTGCAAGAATCAAACCGGAGCGGTGGCGATATCGGGTGTTACATATGATCAAATAATCGGGACTTACACGGCCCAACCGGTTCATCTTGCTTGTAGCAATGCCATCCCATGCACAGACGTTGATCTTACCAATATTCAGTTGAAACCCTCTTCGGGATATGGAGGTCTTGGTCAGGCTTTATGTTTTAACTCGTATGGGAAATCGCTGGCACCTTTGCTTCCTTCAGGCATAGACTCTTGCGTGAGAAGGGATGGTGGTGCAGTCAAGAGAATAGCTAGGTCTCGTGAGCATGTTTGTTTTTAG
Protein:  
MKRDRRLSLLAFMAIIFLLFITSSITSVEAKKHSVKKSKPHKSKHQKDKNIKGNPCPDSSSAPAAPLPNYPTGSKIFDILSFGAKGDGVSDDSKALQAAWKAACKVTGATLEIPSEFKFLIMPITLQGPCMPHLVFQIDGALLAPPKVSSWAKFSLFQWINFKWVHNFTIQGTGFVDGQASEWWTPSDDIYYIQALRFYSSFNVTVRDIRILNSPQCHLKFDNSGGITINNITISSPESSPNTDGIHLQNTRDVEIQHSNIGCGDDCVSIQTGCSNVHIHHINCGPGHGISLGSLGKDKTVACVSDIVVEKISLLNTMAGVRIKTWQGGVGSVKNVSFSNIQVSDVKVPIIIDQYYCDKSVCKNQTGAVAISGVTYDQIIGTYTAQPVHLACSNAIPCTDVDLTNIQLKPSSGYGGLGQALCFNSYGKSLAPLLPSGIDSCVRRDGGAVKRIARSREHVCF